Abstract
Activating mutations in EZH2, the catalytic component of PRC2, promote cell proliferation, tumorigenesis, and metastasis through enzymatic or non-enzymatic activity. The EZH2-Y641 gain-of-function mutation is one of the most significant in diffuse large B-cell lymphoma (DLBCL). Although EZH2 kinase inhibitors, such as EPZ-6438, provide clinical benefit, certain cancer cells are resistant to the enzymatic inhibition of EZH2 because of the inability to functionally target mutant EZH2, or because of cells’ dependence on the non-histone methyltransferase activity of EZH2. Consequently, destroying mutant EZH2 protein may be more effective in targeting EZH2 mutant cancers that are dependent on the non-catalytic activity of EZH2. Here, using extensive selectivity profiling, combined with genetic and animal model studies, we identified USP47 as a novel regulator of mutant EZH2. Inhibition of USP47 would be anticipated to block the function of mutated EZH2 through induction of EZH2 degradation by promoting its ubiquitination. Moreover, targeting of USP47 leads to death of mutant EZH2-positive cells in vitro and in vivo. Taken together, we propose targeting USP47 with a small molecule inhibitor as a novel potential therapy for DLBCL and other hematologic malignancies characterized by mutant EZH2 expression.
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Acknowledgements
We thank Nathanael Gray for his generous provision of reagents and technical support, and Lucia Cabal-Hierro at Dana-Farber Cancer Institute—Harvard Medical School for valuable guidance for the CRISPR-CAS9 KO assay. Our work was supported and founded by National Natural Science Foundation of China (Grant Nos. 82104198, 81903659, 32171479), Natural Science Foundation of Anhui Province (Grant No. 1908085MH259), Leukemia & Lymphoma Society’s New Idea Award, Claudia Adams Barr Award, MPN Research Foundation, Gabrielle’s Angel Foundation, NIH Foundation R01 (CA211681) and 5 P50 CA206963-02.
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JY, EW, and SQ conceptualized, designed, and performed the studies. JY, EW, and SQ carried out data analyses and wrote the papers. WN performed the KD assays and westerns in DLBCL. HM performed the cell viability assays and westerns. ZW helped with the generation of lentivirus particles and site mutagenesis assay. CM helped with cell culturing and western blotting. SZ assisted with shRNA KD/KO studies. MH helped with cell viability assays and westerns. ZQ and AW provided valuable scientific feedback and guidance. YJ synthesized compounds for animal studying. ZJ provided human PBMCs. TH provided human AML and DLBCL patient samples. QL measured the concentration of the compound in tissue. RM provided valuable scientific feedback. LD helped with qPCR assays. WW and JL provided valuable scientific feedback and guidance. SB, QL and JG conceptualized and designed the studies, carried out data analyses, and wrote the manuscript.
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Yang, J., Weisberg, E.L., Qi, S. et al. Inhibition of the deubiquitinating enzyme USP47 as a novel targeted therapy for hematologic malignancies expressing mutant EZH2. Leukemia 36, 1048–1057 (2022). https://doi.org/10.1038/s41375-021-01494-w
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DOI: https://doi.org/10.1038/s41375-021-01494-w
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